cran-comments.md

In AlexJanse/cMut: Identify Clustered Single Nucleotide Mutations and Link Them to Mutational Patterns

SUBMISSION JAN 29 2019:

Thanks, please write package names, software names and API names in single quotes (e.g. 'cMut') in your Description.

If there are references describing the methods in your package, please add these in the Description field of your DESCRIPTION file in the form authors (year) authors (year) authors (year, ISBN:...) with no space after 'doi:', 'arXiv:' and angle brackets for auto-linking.

Please replace \dontrun{} by \donttest{} or unwap the examples if they can be executed in less than 5 sec per Rd-file.

Please fix and resubmit.

Flavor: r-devel-windows-ix86+x86_64

Check: CRAN incoming feasibility, Result: NOTE

Maintainer: 'Alex Janse [e-mail]'

New submission

Possibly mis-spelled words in DESCRIPTION:

Nucleotide (3:34)

cMut (8:46)

nucleotide (7:39)

Flavor: r-devel-linux-x86_64-debian-gcc

Check: CRAN incoming feasibility, Result: NOTE

Maintainer: 'Alex Janse [e-mail]'

New submission

Possibly mis-spelled words in DESCRIPTION:

cMut (8:46)

SUBMISSION JAN 21 2019:

Flavor: r-devel-windows-ix86+x86_64

Check: CRAN incoming feasibility, Result: NOTE

Maintainer: 'Alex Janse [e-mail]'

New submission

Possibly mis-spelled words in DESCRIPTION:

cMut (7:14)

nucleotide (3:34, 7:55)

Unknown, possibly mis-spelled, fields in DESCRIPTION:

'BiocViews'

Uses the superseded package: 'doSNOW'

The Title field should be in title case. Current version is:

'Identify clustered single nucleotide mutations and link them to mutational patterns'

In title case that is:

'Identify Clustered Single Nucleotide Mutations and Link Them to Mutational Patterns'

The Description field should not start with the package name,

'This package' or similar.

Flavor: r-devel-windows-ix86+x86_64

Check: running examples for arch 'i386', Result: NOTE

Examples with CPU or elapsed time > 10s

                    user system elapsed

createRandomMutations 12.6 0.69 13.65

Flavor: r-devel-windows-ix86+x86_64

Check: running examples for arch 'x64', Result: NOTE

Examples with CPU or elapsed time > 10s

                     user system elapsed

createRandomMutations 13.78 0.79 14.6

Flavor: r-devel-linux-x86_64-debian-gcc

Check: CRAN incoming feasibility, Result: NOTE

Maintainer: 'Alex Janse [e-mail]'

New submission

Possibly mis-spelled words in DESCRIPTION:

cMut (7:14)

Unknown, possibly mis-spelled, fields in DESCRIPTION:

'BiocViews'

Uses the superseded package: 'doSNOW'

The Title field should be in title case. Current version is:

'Identify clustered single nucleotide mutations and link them to mutational patterns'

In title case that is:

'Identify Clustered Single Nucleotide Mutations and Link Them to Mutational Patterns'

The Description field should not start with the package name,

'This package' or similar.

Flavor: r-devel-linux-x86_64-debian-gcc

Check: examples, Result: NOTE

Examples with CPU or elapsed time > 10s

                     user system elapsed

createRandomMutations 9.128 1.292 10.424

AlexJanse/cMut documentation built on May 25, 2019, 4 a.m.