Files in AlineTalhouk/nanostringr

Performs Quality Control, Data Normalization, and Batch Effect Correction for 'NanoString nCounter' Data

.Rbuildignore

.github/.gitignore

.github/workflows/R-CMD-check.yaml

.github/workflows/pkgdown.yaml

.github/workflows/test-coverage.yaml

.gitignore

DESCRIPTION

LICENSE

LICENSE.md

NAMESPACE

NEWS.md R/CCplot.R R/HKnorm.R R/NanoStringQC.R R/check.R R/data.R R/nanostringr-package.R R/normalize_pools.R R/normalize_random.R R/read_rcc.R R/refMethod.R R/utils.R README.md

_pkgdown.yml

codecov.yml

cran-comments.md

data/expQC.rda

data/hld.r.rda

data/hlo.r.rda

data/ovc.r.rda

data/ovd.r.rda

data/ovo.r.rda

docs/404.html

docs/LICENSE-text.html

docs/LICENSE.html

docs/articles/Overview.html

docs/articles/Overview_files/figure-html/averageHKPlot-1.png

docs/articles/Overview_files/figure-html/linPCPlot-1.png

docs/articles/Overview_files/figure-html/lodPlot-1.png

docs/articles/Overview_files/figure-html/perFOVPlot-1.png

docs/articles/Overview_files/figure-html/pergdPlot-1.png

docs/articles/Overview_files/figure-html/plot_gene-1.png

docs/articles/Overview_files/figure-html/snPlot-1.png

docs/articles/Overview_files/figure-html/snZoom-1.png

docs/articles/Overview_files/header-attrs-2.6/header-attrs.js

docs/articles/index.html

docs/authors.html

docs/bootstrap-toc.css

docs/bootstrap-toc.js

docs/docsearch.css

docs/docsearch.js

docs/index.html

docs/link.svg

docs/news/index.html

docs/pkgdown.css

docs/pkgdown.js

docs/pkgdown.yml

docs/reference/CCplot-1.png

docs/reference/CCplot-2.png

docs/reference/CCplot-3.png

docs/reference/CCplot.html

docs/reference/HKnorm.html

docs/reference/NanoStringQC.html

docs/reference/Rplot001.png

docs/reference/Rplot002.png

docs/reference/Rplot003.png

docs/reference/cohort.html

docs/reference/expQC.html

docs/reference/index.html

docs/reference/nanostringr-package.html

docs/reference/normalize_pools.html

docs/reference/normalize_random.html

docs/reference/rcc.html

docs/reference/refMethod.html

docs/sitemap.xml

inst/CITATION

inst/extdata/example.RCC

man/CCplot.Rd man/HKnorm.Rd man/NanoStringQC.Rd man/cohort.Rd man/expQC.Rd man/nanostringr-package.Rd man/normalize_pools.Rd man/normalize_random.Rd man/rcc.Rd man/refMethod.Rd

nanostringr.Rproj

tests/testthat.R tests/testthat/test-CCplot.R tests/testthat/test-HKnorm.R tests/testthat/test-NanoStringQC.R tests/testthat/test-order.R tests/testthat/test-parse.R tests/testthat/test-ratioMethod.R vignettes/Overview.Rmd

AlineTalhouk/nanostringr documentation built on Aug. 26, 2023, 4:55 a.m.