function_list.md

In AllenInstitute/atlasplot: Easy Plotting of the Allen Brain Altases

Functions By File

atlasplot/R/adult_mouse.R

• .download_adult_mouse
• .pick_mouse_experiment
• .fetch_mouse_experiments
• .fetch_mouse_unionize
• .plot_mouse_substructures

atlasplot/R/allenapi.R

• .safe_api_call0
• .construct_api_url
• .fetch_ontology

atlasplot/R/brspplot.R

• brsp_subregions_plot
• .create_title
• .create_age_colormap
• .create_str_colormap
• .assign_value

atlasplot/R/cache_system.R

• set_cache_size
• clear_cache
• .json_cache
• .cache_manager
• .cache_size
• .flush_cache
• .remove_file

atlasplot/R/dev_mouse.R

• .download_dev_mouse
• .fetch_dev_mouse_unionize
• .plot_devmouse_substructures

atlasplot/R/expressionCoordinate.R

• .plotExpressionCoordinates2Db

atlasplot/R/fetplot.R

• fet_subregions_plot
• fet_cortex_expression2D_plot
• fet_brain_location_expression_plot
• .format_group
• .construct_image
• .make_cmatrix

atlasplot/R/hbaplot.R

• hba_subregions_plot

atlasplot/R/macaqueplots.R

• .plotMacaqueCortex
• .plotMacaqueCortexSmall
• .findFromGroups
• .plotRectangle
• .numbers_to_colors

atlasplot/R/mouseplot.R

• mouse_subregions_plot

atlasplot/R/nhpplot.R

• nhp_cortex_series_plot
• species_expression_series_plot
• nhp_cortex_expression2D_plot
• nhp_cortex_expression2D_small_plot

atlasplot/R/plotExpressionMap2D.R

• .plotExpressionMap2D

atlasplot/R/verboseBarplot.R

• .verboseBarplot

atlasplot/R/verboseBarplot2.R

• .verboseBarplot2

AllenInstitute/atlasplot documentation built on Aug. 11, 2021, 1:52 a.m.