API for AllenInstitute/scrattch.io
scrattch File Input/Output Handling

Global functions
annotate_cat Man page Source code
annotate_factor Man page Source code
annotate_num Man page
auto_annotate Man page Source code
build_feather Man page Source code
check_tome_existence Man page Source code
cl_to_anno Man page Source code
collapse_along Man page Source code
create_desc Man page Source code
feather_to_list Man page Source code
flip_table Man page Source code
get_feather_data Man page Source code
group_annotations Man page Source code
jagged_to_data.frame Man page Source code
jagged_to_dgCMatrix Man page Source code
jagged_to_matrix Man page Source code
large_matrix_to_dgCMatrix Man page Source code
read_10x_dgCMatrix Man page Source code
read_gene_data_hdf5 Man page Source code
read_h5ad_dgCMatrix Man page Source code
read_loom_anno Man page Source code
read_loom_dgCMatrix Man page Source code
read_loom_projections Man page Source code
read_shelf_gene_data Man page Source code
read_shelf_sample_data Man page Source code
read_tome_anno Man page Source code
read_tome_anno_desc Man page Source code
read_tome_data.frame Man page Source code
read_tome_data_dims Man page Source code
read_tome_dend Man page Source code
read_tome_dend_desc Man page Source code
read_tome_dgCMatrix Man page Source code
read_tome_exon_lengths Man page Source code
read_tome_gene_data Man page Source code
read_tome_gene_meta Man page Source code
read_tome_gene_meta_desc Man page Source code
read_tome_gene_names Man page Source code
read_tome_genes_jagged Man page Source code
read_tome_intron_lengths Man page Source code
read_tome_mapping Man page Source code
read_tome_mapping_desc Man page Source code
read_tome_projection Man page Source code
read_tome_projection_desc Man page Source code
read_tome_sample_data Man page Source code
read_tome_sample_names Man page Source code
read_tome_samples_jagged Man page Source code
read_tome_serialized Man page Source code
read_tome_stats Man page Source code
read_tome_stats_desc Man page Source code
read_tome_total_counts Man page Source code
read_tome_vector Man page Source code
save_sparse_matrix_h5 Man page Source code
set_scrattch.io_global_overwrite Man page Source code
set_scrattch.io_global_verbosity Man page Source code
values_to_colors Man page Source code
varibow Man page Source code
write_dgCMatrix_csv Man page Source code
write_dgCMatrix_h5 Man page Source code
write_tome_anno Man page Source code
write_tome_anno_desc Man page Source code
write_tome_data Man page Source code
write_tome_data.frame Man page Source code
write_tome_dend Man page Source code
write_tome_dend_desc Man page Source code
write_tome_dgCMatrix Man page Source code
write_tome_exon_lengths Man page Source code
write_tome_gene_meta Man page Source code
write_tome_gene_meta_desc Man page Source code
write_tome_group Man page Source code
write_tome_intron_lengths Man page Source code
write_tome_mapping Man page Source code
write_tome_projection Man page Source code
write_tome_projection_desc Man page Source code
write_tome_serialized Man page Source code
write_tome_sifter_stats Man page Source code
write_tome_stats Man page Source code
write_tome_stats_desc Man page Source code
write_tome_vector Man page Source code
AllenInstitute/scrattch.io documentation built on Nov. 17, 2021, 10:06 a.m.