impact_gene_info: IMPACT Gene Meta Data

In AxelitoMartin/gnomeR: Wrangle and analyze IMPACT and TCGA mutation data

IMPACT Gene Meta Data

Description

Dataframe labeling all genes found in IMPACT along with their corresponding platform and Entrez ID.

Usage

impact_gene_info

Format

A data frame with 469 observations and 5 variables

hugo_symbol

Column containing all HUGO symbols genes included in IMPACT

platform_341

Character, indicates whether each gene was included in IMPACT platform 341. Options are included and not included

platform_410

Character, indicates whether each gene was included in IMPACT platform 410. Options are included and not included

platform_468

Character, indicates whether each gene was included in IMPACT platform 468. Options are included and not included

alias

List of EntrezIDs corresponding to the value in the hugo_symbol column and alias list.

entrez_id

List of known aliases corresponding to the value in the hugo_symbol column.

Source

https://cbioportal.mskcc.org/

AxelitoMartin/gnomeR documentation built on April 21, 2022, 3:01 p.m.