README.md
In BRL-BCM/MolPhenoMatch: Molecular Phenotype Patient Matchmaking
MolPhenoMatch
An R package for molecular phenotype patient matchmaking.
Installation
In R, install the devtools package, and install MolPhenoMatch by install_github(“BRL-BCM/MolPhenoMatch”).
Look at the Driver Script
The driver script is called “main_molphenomatch.r”. It will take you across all the stages in the analysis pipeline, including:
- Data load
- Experiment Preparation
- Permutations generation
- Calculate minimum encoding length
- Calculate patient similarity, based on mutual information.
BRL-BCM/MolPhenoMatch documentation built on May 26, 2019, 6:38 a.m.
R Package Documentation
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
MolPhenoMatch
An R package for molecular phenotype patient matchmaking.
Installation
In R, install the devtools package, and install MolPhenoMatch by install_github(“BRL-BCM/MolPhenoMatch”).
Look at the Driver Script
The driver script is called “main_molphenomatch.r”. It will take you across all the stages in the analysis pipeline, including:
- Data load
- Experiment Preparation
- Permutations generation
- Calculate minimum encoding length
- Calculate patient similarity, based on mutual information.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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