This package is designed to provide solutions for quality assessment and to detect differentially expressed genes for the Affymetrix GeneChips, including both 3' -arrays and gene 1.0-ST arrays. The package generates comprehensive analysis reports in HTML format. Hyperlinks on the report page will lead to a series of QC plots, processed data, and differentially expressed gene lists. Differentially expressed genes are reported in tabular format with annotations hyperlinked to online biological databases.
|Author||Xiwei Wu, Arthur Li|
|Bioconductor views||Annotation DifferentialExpression Microarray OneChannel Preprocessing QualityControl ReportWriting StatisticalMethod Visualization|
|Maintainer||Arthur Li <[email protected]>|
|License||LGPL (>= 2.0)|
|Package repository||View on GitHub|
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