Bioconductor-mirror/BioQC: Detect tissue heterogeneity in expression profiles with gene sets

BioQC performs quality control of high-throughput expression data based on tissue gene signatures. It can detect tissue heterogeneity in gene expression data. The core algorithm is a Wilcoxon-Mann-Whitney test that is optimised for high performance.

Getting started

Package details

AuthorJitao David Zhang <[email protected]>, Laura Badi, Gregor Sturm, Roland Ambs
Bioconductor views GeneExpression QualityControl StatisticalMethod
MaintainerJitao David Zhang <[email protected]>
LicenseGPL (>=3)
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
Bioconductor-mirror/BioQC documentation built on Aug. 10, 2017, 9:46 a.m.