Man pages for Bioconductor-mirror/CONFESS
Cell OrderiNg by FluorEScence Signal

addKpredictionsaddKpredictions
adjustFluoadjustFluo
aveDiffaveDiff
BatchFluoBatchFluo
BGcorrectFluoBGcorrectFluo
boxcoxMatrixboxcoxMatrix
boxcoxMatrixEstboxcoxMatrixEst
boxFluoboxFluo
caseof0scaseof0s
caseof1R0Gcaseof1R0G
caseof1R1Gcaseof1R1G
caseof1R2Gcaseof1R2G
caseof2R1Gcaseof2R1G
caseof2R2Gcaseof2R2G
caseof2Rs0Gcaseof2Rs0G
cluclu
cluster2outliercluster2outlier
contrastFluocontrastFluo
cpointscpoints
cpPELTcpPELT
createFluocreateFluo
cutpointsEstimatorcutpointsEstimator
CVsamplerCVsampler
DDHFfitDDHFfit
DDHFinputDDHFinput
ddhft.np.2ddhft.np.2
defineLocClustersdefineLocClusters
denoisefundenoisefun
denoiserdenoiser
despecklefundespecklefun
diagnoseResidualsdiagnoseResiduals
distfromcenterdistfromcenter
doTransformdoTransform
estimate.new.pseudotimesestimate.new.pseudotimes
estimatePathestimatePath
estimatesestimates
estimates.2estimates.2
extractBFAreaextractBFarea
failurecasefailurecase
fclustfclust
filesfiles
filled.contour3filled.contour3
findPatternfindPattern
fixPathFixPath
flowclust_step1flowclust_step1
flowclust_step2flowclust_step2
Fluo_adjustmentFluo_adjustment
Fluo_CV_modelingFluo_CV_modeling
Fluo_CV_prepFluo_CV_prep
Fluo_inspectionFluo_inspection
FluoInspectionFluoInspection
Fluo_modelingFluo_modeling
Fluo_orderingFluo_ordering
FluoSelection_byRunFluoSelection_byRun
forceBFforceBF
function.from.vectorfunction.from.vector
GAPanalysisGAPanalysis
getCoordinates_statsgetCoordinates_stats
getCsFAILgetCsFAIL
getFluogetFluo
getFluo_byRungetFluo_byRun
getSpotgetSpot
giveWarninggiveWarning
grouplinesgrouplines
grubbsgrubbs
GrubbsOutliersGrubbsOutliers
highlight.colshighlight.cols
invTransforminvTransform
isotoneisotone
joinAreasjoinAreas
listSorterlistSorter
lmFluolmFluo
LocationMatrixLocationMatrix
mean_signalmean_signal
measureBmeasureB
measureFmeasureF
multiplotmultiplot
mytmyt
orderFluoorderFluo
pathEstimatorpathEstimator
path.initiatorpath.initiator
pathUpdaterpathUpdater
plot_clusgapplot_clusgap
plotImagesplotImages
predict.kmeanspredict.kmeans
processImgprocessImg
projectproject
readChaImgreadChaImg
readFilesreadFiles
readOriImgreadOriImg
reestimate.pseudos.byCVreestimate.pseudos.byCV
refineMixesrefineMixes
ResultsResults
revDDHFinputrevDDHFinput
signal.from.matrixsignal.from.matrix
significantSignalsignificantSignal
simcellssimcells
sortCentroidssortCentroids
SpotbyStrLinesSpotbyStrLines
spotCenterspotCenter
spotCoordsspotCoords
spotEstimatorspotEstimator
spot.simulatorspot.simulator
SpotStatsspotStats
step1step1
step2step2
step2.1step2.1
step3step3
step3.1step3.1
step4step4
steps2_4steps2_4
straightColLinesstraightColLines
straightRowLinesstraightRowLines
subsetAnalysissubsetAnalysis
summarizeAdjFluosummarizeAdjFluo
transformFluotransformFluo
trigofuntrigofun
unnormalizeC01unnormalizeC01
updateCentroidsupdateCentroids
updateCentroidsPathsupdateCentroidsPaths
which.min.diffwhich.min.diff
zoomInBFzoomInBF
Bioconductor-mirror/CONFESS documentation built on May 29, 2017, 1:12 a.m.