Files in Bioconductor-mirror/ChAMP
Chip Analysis Methylation Pipeline for Illumina HumanMethylation450 and EPIC

DESCRIPTION
NAMESPACE
R/Block.GUI.R R/CheckBMIQ.R R/CpG.GUI.R R/DMP.GUI.R R/DMR.GUI.R R/DoPBC.R R/EstDimRMTv2.R R/QC.GUI.R R/champ.BMIQ.R R/champ.Block.R R/champ.CNA.R R/champ.ComBat.R R/champ.DMP.R R/champ.DMR.R R/champ.EpiMod.R R/champ.GSEA.R R/champ.QC.R R/champ.SVD.R R/champ.colname.R R/champ.filter.R R/champ.import.R R/champ.impute.R R/champ.load.R R/champ.norm.R R/champ.process.R R/champ.read.R R/champ.refbase.R R/champ.runCombat.R R/zzz.R
build/vignette.rds
inst/CITATION
inst/NEWS.Rd
inst/doc/ChAMP.R inst/doc/ChAMP.Rmd
inst/doc/ChAMP.html
inst/extdata/CNAimage.jpg
inst/extdata/CNAtext.jpg
inst/extdata/DMR.jpg
inst/extdata/DMRdistributionplot.png
inst/extdata/DMRoutput.jpg
inst/extdata/MVP1.jpg
inst/extdata/MVP2.jpg
inst/extdata/MVP3.jpg
inst/extdata/SVDsummary.pdf
inst/extdata/checkBMIQ.jpg
inst/extdata/densityPlot.jpg
inst/extdata/failedProbes.jpg
inst/extdata/figure1.pdf
inst/extdata/lasso.jpg
inst/extdata/logo4.jpg
inst/extdata/mdsPlot.jpg
inst/extdata/probeFeatures.jpg
inst/extdata/radius.jpg
inst/extdata/rawSampleCluster.jpg
inst/extdata/sampleSheetexample.jpg
inst/extdata/studyInfo.jpg
inst/extdata/studyInfo.png
inst/extdata/type1fit.jpg
inst/extdata/type2fit.jpg
man/Block.GUI.Rd man/ChAMP-package.Rd man/CpG.GUI.Rd man/DMP.GUI.Rd man/DMR.GUI.Rd man/QC.GUI.Rd man/champ.Block.Rd man/champ.CNA.Rd man/champ.DMP.Rd man/champ.DMR.Rd man/champ.EpiMod.Rd man/champ.GSEA.Rd man/champ.QC.Rd man/champ.SVD.Rd man/champ.filter.Rd man/champ.import.Rd man/champ.impute.Rd man/champ.load.Rd man/champ.norm.Rd man/champ.process.Rd man/champ.refbase.Rd man/champ.runCombat.Rd vignettes/ChAMP.Rmd
vignettes/ChAMP.bib
vignettes/ChAMP.css
vignettes/Figure/BMIQ.jpg
vignettes/Figure/Block-1.png
vignettes/Figure/Block-2.png
vignettes/Figure/Block-3.png
vignettes/Figure/CNA.jpg
vignettes/Figure/CNAGroupPlot.jpg
vignettes/Figure/ChAMP_Pipeline.png
vignettes/Figure/CpGGUI.png
vignettes/Figure/DMP-1.png
vignettes/Figure/DMP-2.png
vignettes/Figure/DMP-3.png
vignettes/Figure/DMP-4.png
vignettes/Figure/DMP-5.png
vignettes/Figure/DMR-1.png
vignettes/Figure/DMR-2.png
vignettes/Figure/DMR-3.png
vignettes/Figure/DMR-4.png
vignettes/Figure/Demo450KSVD.png
vignettes/Figure/EpiMod.jpg
vignettes/Figure/HannumDMPGUIplot-2.png
vignettes/Figure/HannumDMPGUIplot.png
vignettes/Figure/HannumSVD.png
vignettes/Figure/Logo.jpg
vignettes/Figure/QCGUI.jpg
vignettes/academic-medicine.csl
vignettes/header.html
Bioconductor-mirror/ChAMP documentation built on Aug. 10, 2017, 9:47 a.m.