API for Bioconductor-mirror/CopyNumber450k
R package for calling CNV from Illumina 450k methylation microarrays

Global functions
CNV450kSet Man page Source code
CNV450kSet-class Man page
CopyNumber450k Man page
buildControlMatrix450k Source code
computeSignificance Man page
computeSignificance,CNV450kSet-method Man page
dropSNPprobes Man page
dropSNPprobes,CNV450kSet-method Man page
extractControls Source code
extractFromRGChannelSet450k Source code
findCNV Man page
findCNV,CNV450kSet-method Man page
functionalNormalization Source code
getManifest Man page
getManifest,CNV450kSet-method Man page
getSegments Man page
getSegments,CNV450kSet-method Man page
getSummary Man page
getSummary,CNV450kSet-method Man page
intersectCNV Man page
intersectCNV,CNV450kSet-method Man page
normalize Man page
normalize,CNV450kSet-method Man page
normalizeByType Source code
onAttach Source code
plotDensity Man page
plotDensity,CNV450kSet-method Man page
plotPCA Man page
plotPCA,CNV450kSet-method Man page
plotSample Man page
plotSample,CNV450kSet-method Man page
quantileNormalization Source code
returnFit Source code
segmentize Man page
segmentize,CNV450kSet-method Man page
subgroupDifference Man page
subgroupDifference,CNV450kSet-method Man page
subgroupDifferenceCNVByType Source code
write.csv,CNV450kSet-method Man page
Bioconductor-mirror/CopyNumber450k documentation built on May 29, 2017, 2:15 a.m.