Bioconductor-mirror/CountClust: Clustering and Visualizing RNA-Seq Expression Data using Grade of Membership Models

Fits grade of membership models (GoM, also known as admixture models) to cluster RNA-seq gene expression count data, identifies characteristic genes driving cluster memberships, and provides a visual summary of the cluster memberships.

Getting started

Package details

AuthorKushal Dey [aut, cre], Joyce Hsiao [aut], Matthew Stephens [aut]
Bioconductor views Clustering GeneExpression RNASeq Sequencing Software StatisticalMethod Visualization
MaintainerKushal Dey <[email protected]>
LicenseGPL (>= 2)
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
Bioconductor-mirror/CountClust documentation built on May 29, 2017, 2:15 a.m.