Bioconductor-mirror/HTSFilter: Filter replicated high-throughput transcriptome sequencing data

This package implements a filtering procedure for replicated transcriptome sequencing data based on a global Jaccard similarity index in order to identify genes with low, constant levels of expression across one or more experimental conditions.

Getting started

Package details

AuthorAndrea Rau, Melina Gallopin, Gilles Celeux, and Florence Jaffrezic
Bioconductor views DifferentialExpression GeneExpression Normalization Preprocessing RNASeq Sequencing
MaintainerAndrea Rau <[email protected]>
LicenseArtistic-2.0
Version1.17.1
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("Bioconductor-mirror/HTSFilter")
Bioconductor-mirror/HTSFilter documentation built on July 28, 2017, 5:25 a.m.