API for Bioconductor-mirror/IHW
Independent Hypothesis Weighting

Global functions
adj_pvalues Man page
adj_pvalues,ihwResult-method Man page
adj_pvalues_ihwResult Source code
adjustment_type_ihwResult Source code
alpha Man page
alpha,ihwResult-method Man page
alpha_ihwResult Source code
as.data.frame,ihwResult-method Man page
as.data.frame_ihwResult Man page Source code
covariate_type Man page
covariate_type,ihwResult-method Man page
covariate_type_ihwResult Source code
covariates Man page
covariates,ihwResult-method Man page
covariates_ihwResult Source code
fill_nas_reorder Source code
filter_pvals_for_optim Source code
get_bh_threshold Man page Source code
get_bh_thresholds Source code
get_wbh_weights Source code
groups_by_filter Man page Source code
groups_factor Man page
groups_factor,ihwResult-method Man page
groups_factor_ihwResult Source code
ihw Man page Source code
ihw.DESeqResults Man page Source code
ihw.default Man page Source code
ihw.formula Man page Source code
ihwResult Man page
ihwResult-class Man page
ihw_convex Source code
ihw_internal Source code
ihw_milp Source code
lsl_pi0_est Source code
m_groups Man page
m_groups,ihwResult-method Man page
m_groups_ihwResult Source code
mydiv Source code
nbins Man page
nbins,ihwResult-method Man page
nbins_ihwResult Source code
nfolds Man page
nfolds,ihwResult-method Man page
nfolds_ihwResult Source code
normalize_weights Source code
nrow,ihwResult-method Man page
padj_to_threshold Source code
per_bin_fdrs Source code
plot,ihwResult-method Man page
plot_decisionboundary Source code
plot_weights Source code
plugin_fdr.ihwResult Source code
presorted_grenander Source code
pvalues Man page
pvalues,ihwResult-method Man page
pvalues_ihwResult Source code
regularization_term Man page
regularization_term,ihwResult-method Man page
regularization_term_ihwResult Source code
regularize_weights Source code
rejected_hypotheses Man page
rejected_hypotheses,ihwResult-method Man page
rejected_hypotheses_ihwResult Source code
rejections Man page
rejections,ihwResult-method Man page
rejections_ihwResult Source code
show,ihwResult-method Man page
stratification_breaks.ihwResult Source code
stratum_sizes Source code
thresholds Man page
thresholds,ihwResult-method Man page
thresholds_ihwResult Source code
thresholds_to_weights Source code
thresholds_to_weights_full Source code
total_variation Source code
uniform_deviation Source code
weighted_pvalues Man page
weighted_pvalues,ihwResult-method Man page
weighted_pvalues_ihwResult Source code
weights,ihwResult-method Man page
weights_ihwResult Source code
Bioconductor-mirror/IHW documentation built on May 29, 2017, 6:28 a.m.