Files in Bioconductor-mirror/IRanges
Infrastructure for manipulating intervals on sequences

DESCRIPTION
NAMESPACE
NEWS
R/AtomicList-class.R R/AtomicList-impl.R R/AtomicList-utils.R R/CompressedHitsList-class.R R/CompressedList-class.R R/CompressedList-comparison.R R/DataFrame-utils.R R/DataFrameList-class.R R/DataFrameList-utils.R R/Grouping-class.R R/Hits-class-leftovers.R R/IPos-class.R R/IRanges-class.R R/IRanges-constructor.R R/IRanges-utils.R R/List-class-leftovers.R R/ListGrouping-class.R R/MaskCollection-class.R R/NCList-class.R R/RangedData-class.R R/RangedData-utils.R R/RangedSelection-class.R R/Ranges-class.R R/Ranges-comparison.R R/RangesList-class.R R/Rle-class-leftovers.R R/RleViews-class.R R/RleViews-utils.R R/RleViewsList-class.R R/RleViewsList-utils.R R/Vector-class-leftovers.R R/Views-class.R R/ViewsList-class.R R/bind-arrays.R R/cbind-Rle-methods.R R/coverage-methods.R R/extractList.R R/findOverlaps-methods.R R/inter-range-methods.R R/intra-range-methods.R R/multisplit.R R/nearest-methods.R R/range-squeezers.R R/read.Mask.R R/reverse-methods.R R/seqapply.R R/setops-methods.R R/slice-methods.R R/subsetting-utils.R R/tile-methods.R R/zzz.R
TODO
inst/CITATION
inst/extdata/ce2chrM.bed
inst/extdata/ce2chrM.fa.out
inst/extdata/hg18liftAll.lft
inst/extdata/hs_b36v3_chrY.agp
inst/include/IRanges_defines.h
inst/include/IRanges_interface.h
inst/include/_IRanges_stubs.c
inst/unitTests/test_AtomicList-class.R inst/unitTests/test_AtomicList-utils.R inst/unitTests/test_DataFrame-utils.R inst/unitTests/test_DataFrameList.R inst/unitTests/test_Grouping-class.R inst/unitTests/test_HitsList.R inst/unitTests/test_IRanges-class.R inst/unitTests/test_NCList-class.R inst/unitTests/test_Ranges-comparison.R inst/unitTests/test_RangesList-class.R inst/unitTests/test_RleViews.R inst/unitTests/test_RleViewsList.R inst/unitTests/test_bind-arrays.R inst/unitTests/test_coverage-methods.R inst/unitTests/test_extractList.R inst/unitTests/test_findOverlaps-methods.R inst/unitTests/test_inter-range-methods.R inst/unitTests/test_intra-range-methods.R inst/unitTests/test_nearest-methods.R inst/unitTests/test_seqapply.R inst/unitTests/test_setops-methods.R inst/unitTests/test_split.R inst/unitTests/test_tile-methods.R man/AtomicList-class.Rd man/AtomicList-utils.Rd man/CompressedHitsList-class.Rd man/CompressedList-class.Rd man/DataFrame-utils.Rd man/DataFrameList-class.Rd man/Grouping-class.Rd man/Hits-class-leftovers.Rd man/IPos-class.Rd man/IRanges-class.Rd man/IRanges-constructor.Rd man/IRanges-internals.Rd man/IRanges-utils.Rd man/IRangesList-class.Rd man/List-class-leftovers.Rd man/MaskCollection-class.Rd man/NCList-class.Rd man/RangedData-class.Rd man/RangedSelection-class.Rd man/Ranges-class.Rd man/Ranges-comparison.Rd man/RangesList-class.Rd man/Rle-class-leftovers.Rd man/RleViews-class.Rd man/RleViewsList-class.Rd man/Vector-class-leftovers.Rd man/Views-class.Rd man/ViewsList-class.Rd man/bind-arrays.Rd man/coverage-methods.Rd man/extractList.Rd man/findOverlaps-methods.Rd man/inter-range-methods.Rd man/intra-range-methods.Rd man/multisplit.Rd man/nearest-methods.Rd man/range-squeezers.Rd man/read.Mask.Rd man/reverse-methods.Rd man/seqapply.Rd man/setops-methods.Rd man/slice-methods.Rd man/view-summarization-methods.Rd
src/CompressedAtomicList_utils.c
src/CompressedIRangesList_class.c
src/CompressedList_class.c
src/Grouping_class.c
src/IRanges.h
src/IRanges_class.c
src/IRanges_constructor.c
src/NCList.c
src/R_init_IRanges.c
src/Ranges_class.c
src/Ranges_comparison.c
src/RleViews_utils.c
src/S4Vectors_stubs.c
src/SimpleRangesList_class.c
src/coverage_methods.c
src/inter_range_methods.c
tests/run_unitTests.R
vignettes/IRangesOverview.Rnw
Bioconductor-mirror/IRanges documentation built on July 28, 2017, 4:22 a.m.