Files in Bioconductor-mirror/KEGGgraph
KEGGgraph: A graph approach to KEGG PATHWAY in R and Bioconductor

.Rbuildignore
ChangeLog
DESCRIPTION
Makefile
NAMESPACE
NEWS
R/annotation.R R/graph.R R/kegg2graph-functions.R R/kgmlfile.R R/misc.R R/parse.R R/vis.R
data/KEGGEdgeSubtype.csv
data/KEGGEdgeType.csv
data/KEGGNodeType.csv
data/colorectalcancerSPIA.RData
inst/CITATION
inst/extdata/hsa00020.xml
inst/extdata/hsa04010.xml
inst/extdata/hsa04012.xml
inst/extdata/hsa04110.xml
inst/extdata/hsa04115.xml
inst/extdata/hsa04210.xml
inst/extdata/hsa04310.xml
inst/extdata/hsa04350.xml
inst/extdata/hsa04370.xml
inst/extdata/hsa04630.xml
inst/extdata/hsa05210.xml
inst/extdata/hsa05212.xml
inst/extdata/kgml-ed-toy.xml
inst/extdata/ko00051.xml
inst/extdata/map00260.xml
inst/unitTests/test_KEGGgraph.R man/KEGGEdge-class.Rd man/KEGGEdgeSubType-class.Rd man/KEGGEdgeSubtype.Rd man/KEGGGraphics-class.Rd man/KEGGGroup-class.Rd man/KEGGNode-class.Rd man/KEGGPathway-class.Rd man/KEGGPathwayInfo-class.Rd man/KEGGReaction-class.Rd man/KEGGpathway2Graph.Rd man/KEGGpathway2reactionGraph.Rd man/expandKEGGNode.Rd man/expandKEGGPathway.Rd man/getDisplayName-methods.Rd man/getEntryID-methods.Rd man/getKEGGID-methods.Rd man/getKEGGgeneLink-methods.Rd man/getKEGGnodeData.Rd man/getKGMLurl.Rd man/getName-methods.Rd man/getNamedElement.Rd man/getPathwayInfo-methods.Rd man/getReactions-methods.Rd man/getRgraphvizEdgeNames.Rd man/getSubtype-methods.Rd man/getTitle-methods.Rd man/getType-methods.Rd man/getValue-methods.Rd man/graphDensity.Rd man/isHomoList.Rd man/kgmlFileName2PathwayName.Rd man/mergeGraphs.Rd man/mergeKEGGgraphs.Rd man/neighborhood.Rd man/parseEntry.Rd man/parseGraphics.Rd man/parseKGML.Rd man/parseKGML2DataFrame.Rd man/parseKGML2Graph.Rd man/parseKGMLexpandMaps.Rd man/parsePathwayInfo.Rd man/parseReaction.Rd man/parseRelation.Rd man/parseSubType.Rd man/plotKEGGgraph.Rd man/pvalue2asterisk.Rd man/queryKEGGsubgraph.Rd man/randomSubGraph.Rd man/splitKEGGgroup.Rd man/subGraphByNodeType.Rd man/subKEGGgraph.Rd man/subtypeDisplay-methods.Rd man/top.Rd man/translateKEGGID2GeneID.Rd man/translateKEGGgraph.Rd tests/kegg2graph.R tests/testGraph.R
vignettes/KEGGgraph.Rnw
vignettes/KEGGgraphApp.Rnw
Bioconductor-mirror/KEGGgraph documentation built on July 28, 2017, 4:22 a.m.