Bioconductor-mirror/LPEadj: A correction of the local pooled error (LPE) method to replace the asymptotic variance adjustment with an unbiased adjustment based on sample size.

Two options are added to the LPE algorithm. The original LPE method sets all variances below the max variance in the ordered distribution of variances to the maximum variance. in LPEadj this option is turned off by default. The second option is to use a variance adjustment based on sample size rather than pi/2. By default the LPEadj uses the sample size based variance adjustment.

Getting started

Package details

AuthorCarl Murie <[email protected]>, Robert Nadon <[email protected]>
Bioconductor views Microarray Proteomics
MaintainerCarl Murie <[email protected]>
LicenseLGPL
Version1.37.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("Bioconductor-mirror/LPEadj")
Bioconductor-mirror/LPEadj documentation built on May 28, 2017, 6:58 p.m.