API for Bioconductor-mirror/MIGSA
Massive and Integrative Gene Set Analysis

Global functions
$,MIGSAres-method Man page
ExprData-class Man page
FitOptions Man page Source code
FitOptions-class Man page
FitOptions.data.frame Man page Source code
FitOptions.default Man page Source code
GSEAparams Man page
GSEAparams-class Man page
Genesets-enrichr Man page
IGSAinput Man page
IGSAinput-class Man page
IGSAinput-getterSetters Man page
MIGSA Man page
MIGSA,list Man page
MIGSA,list-method Man page
MIGSAPackage Man page
MIGSAPackage-package Man page
MIGSAmGSZ Man page
MIGSAmGSZ,matrix,list,vector-method Man page
MIGSAres Source code
MIGSAres-GOanalysis Man page
MIGSAres-class Man page
MIGSAres-common Man page
MIGSAres-genes Man page
MIGSAres-plots Man page
MIGSAres.data.table Source code
MIGSAres.list Source code
SEAparams Man page
SEAparams-class Man page
[,MIGSAres,ANY,ANY,ANY-method Man page
as.Genesets Man page
as.Genesets,list-method Man page
as.data.frame,MIGSAres Man page
as.data.frame,MIGSAres-method Man page
as.data.table.GSEAres Source code
as.data.table.GenesetsRes Source code
as.data.table.IGSAres Source code
as.data.table.SEAres Source code
bcMigsaRes Man page
colnames,MIGSAres Man page
colnames,MIGSAres-method Man page
dim,MIGSAres-method Man page
downloadEnrichrGeneSets Man page
downloadEnrichrGeneSets,ANY-method Man page
downloadEnrichrGeneSets,character-method Man page
enrichrGeneSets Man page
enrichrGeneSets,ANY-method Man page
enrichrGeneSets,character-method Man page
exprData Man page
exprData,IGSAinput-method Man page
exprData<- Man page
exprData<-,IGSAinput-method Man page
filterByGenes Man page
filterByGenes,MIGSAres,character-method Man page
fitOptions Man page
fitOptions,IGSAinput-method Man page
fitOptions<- Man page
fitOptions<-,IGSAinput-method Man page
geneSetBarplot Man page
geneSetBarplot,MIGSAres-method Man page
geneSetsFromFile Man page
geneSetsFromFile,character-method Man page
geneSetsList Man page
geneSetsList,IGSAinput-method Man page
geneSetsList<- Man page
geneSetsList<-,IGSAinput-method Man page
genesBarplot Man page
genesBarplot,MIGSAres-method Man page
genesHeatmap Man page
genesHeatmap,MIGSAres-method Man page
genesInSets Man page
genesInSets,MIGSAres-method Man page
getAdditionalInfo Man page
getAdditionalInfo,MIGSAres Man page
getAdditionalInfo,MIGSAres-method Man page
getDEGenes Man page
getDEGenes,IGSAinput Man page
getDEGenes,IGSAinput-method Man page
getHeights Man page
getHeights,character-method Man page
gseaParams Man page
gseaParams,IGSAinput-method Man page
gseaParams<- Man page
gseaParams<-,IGSAinput-method Man page
head,MIGSAres Man page
head,MIGSAres-method Man page
loadGo Man page
loadGo,character-method Man page
mGszEbayes Source code
merge,MIGSAres,MIGSAres Man page
merge,MIGSAres,MIGSAres-method Man page
migsaGoTree Man page
migsaGoTree,MIGSAres-method Man page
migsaHeatmap Man page
migsaHeatmap,MIGSAres-method Man page
migsaRes Man page
name Man page
name,IGSAinput-method Man page
name<- Man page
name<-,IGSAinput-method Man page
seaParams Man page
seaParams,IGSAinput-method Man page
seaParams<- Man page
seaParams<-,IGSAinput-method Man page
setEnrCutoff Man page
setEnrCutoff,MIGSAres,numeric-method Man page
show,MIGSAres Man page
show,MIGSAres-method Man page
summary Man page
summary,GSEAparams-method Man page
summary,IGSAinput-method Man page
summary,MIGSAres-method Man page
summary,SEAparams-method Man page
summary.GSEAparams Man page Source code
summary.IGSAinput Man page Source code
summary.MIGSAres Man page Source code
summary.SEAparams Man page Source code
tail,MIGSAres Man page
tail,MIGSAres-method Man page
voomLimaRank Source code
Bioconductor-mirror/MIGSA documentation built on June 23, 2017, 3:15 p.m.