This function reads and annotates matrix S.
The file which contains the matrix of
feature projections. It must be a txt file where the
The file which contains the matrix (of
dimension features x samples) based on which the matrix S
was calculated. It must be a txt file where the separator
The data based on which the matrix A was calculated (features x samples)
TRUE (default) if the Afile contains rownames of matrix A, FALSE if the rownames has to be extracted from dat
The matrix dat must be the one on which the matrix S was
calculated. It is assumed that the number of components
is lower than the number of features, the matrix will be
transposed to have dimension 'features x components'
according to this assumption. If
annot is FALSE,
rownames of dat are used to annotate rownames of S.
This function returns a matrix of dimension features x components with rownames filled with feature IDs.
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