Description Usage Arguments Details Value Author(s) Examples

This function performs ICA decomposition of a matrix
using functions `fastICA`

and
`JADE`

.

1 2 3 4 |

`method` |
The ICA method to use, either "JADE" (the default) or "fastICA". |

`X` |
A data matrix with n rows representing observations (e.g genes) and p columns representing variables (e.g samples). |

`nbComp` |
The number of components to be extracted. |

`alg.type` |
If |

`fun` |
The functional form of the G function used in
the approximation to neg-entropy (see 'details' of the
help of function |

`maxit` |
The maximum number of iterations to perform. |

`tol` |
A positive scalar giving the tolerance at which the un-mixing matrix is considered to have converged. |

`...` |
Additional parameters for |

See details of the functions
`fastICA`

and
`JADE`

.

A list, see outputs of `fastICA`

and
`JADE`

. This list includes at least
three elements:

- A
the estimated mixing matrix

- S
the estimated source matrix

, itemWthe estimated unmixing matrix

Anne Biton

1 2 3 4 5 |

Bioconductor-mirror/MineICA documentation built on May 29, 2017, 8:30 a.m.

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