Bioconductor-mirror/PGA: An package for identification of novel peptides by customized database derived from RNA-Seq
Version 1.7.3

This package provides functions for construction of customized protein databases based on RNA-Seq data with/without genome guided, database searching, post-processing and report generation. This kind of customized protein database includes both the reference database (such as Refseq or ENSEMBL) and the novel peptide sequences form RNA-Seq data.

Getting started

Package details

AuthorShaohang Xu, Bo Wen
Bioconductor views MassSpectrometry Proteomics RNASeq ReportWriting Sequencing Software
MaintainerBo Wen <[email protected]>, Shaohang Xu <[email protected]>
LicenseGPL-2
Version1.7.3
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("Bioconductor-mirror/PGA")
Bioconductor-mirror/PGA documentation built on June 26, 2017, 10:26 p.m.