API for Bioconductor-mirror/PGA
An package for identification of novel peptides by customized database derived from RNA-Seq

Global functions
OutputNovelJun2 Source code
OutputVarproseq2 Source code
Outputaberrant2 Source code
PrepareAnnotationEnsembl2 Man page Source code
PrepareAnnotationRefseq2 Man page Source code
Sys.which2 Source code
addGeneName4Ensembl Man page Source code
base_transfer Source code
check_parser Source code
createProDB4DenovoRNASeq Man page Source code
dbCreator Man page Source code
dbcat Source code
easyRun Man page Source code
gen_splicmatrix Source code
getNovelTx Source code
get_30aa_splited_seq Source code
highlightjuc Source code
highlightsite Source code
java.executable Source code
juc_type Source code
mut_count_pro Source code
mut_freq_heatmap Source code
mybarplot Source code
parserGear Man page Source code
peptide_number_of_ntx Source code
precursor_error_hist Source code
reportGear Man page Source code
reportIDL Source code
reportJUC Source code
reportNTX Source code
reportSNV Source code
runTandem Man page Source code
spplot Source code
wm_charge_bar Source code
wm_evalue_hist Source code
wm_mass_hist Source code
Bioconductor-mirror/PGA documentation built on June 26, 2017, 10:26 p.m.