Bioconductor-mirror/Polyfit: Add-on to DESeq to improve p-values and q-values
Version 1.11.0

Polyfit is an add-on to the packages DESeq which ensures the p-value distribution is uniform over the interval [0, 1] for data satisfying the null hypothesis of no differential expression, and uses an adpated Storey-Tibshiran method to calculate q-values.

Getting started

Package details

AuthorConrad Burden
Bioconductor views DifferentialExpression GeneExpression RNASeq Sequencing
MaintainerConrad Burden <[email protected]>
LicenseGPL (>= 3)
Version1.11.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("Bioconductor-mirror/Polyfit")
Bioconductor-mirror/Polyfit documentation built on May 31, 2017, 10:36 p.m.