This virtual class represents the output of a DAVID "Cluster" report, with "DAVIDTermCluster" and "DAVIDGeneCluster" as possible heirs, according to the report used.
This class is a "
DAVIDResult in the conceptual way.
Functional Annotation Clustering report.
DAVIDGeneCluster: DAVID's Functional
Classification Tool report.
named list with the different clustered terms/genes: Members, represented as DAVIDGenes object; and EnrichmentScore, a numeric with DAVID cluster enrichment score.
basic console output.
basic summary console output.
fileName="character"): basic cluster report file
getter for the corresponding slot.
obtain the enrichment score of each cluster.
obtain the corresponding cluster members.
Cristobal Fresno and Elmer A Fernandez
The Database for Annotation, Visualization and Integrated Discovery (david.abcc.ncifcrf.gov)
Huang, D. W.; Sherman, B. T.; Tan, Q.; Kir, J.; Liu, D.; Bryant, D.; Guo, Y.; Stephens, R.; Baseler, M. W.; Lane, H. C.; Lempicki, R. A. DAVID Bioinformatics Resources: expanded annotation database and novel algorithms to better extract biology from large gene lists. Nucleic Acids Res, Laboratory of Immunopathogenesis and Bioinformatics, SAIC-Frederick, Inc., National Cancer Institute at Frederick, MD 21702, USA., 2007, 35, W169-W175
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