Starting with a BAM file, this package provides the necessary functions for quality assessment, read start position recalibration, the counting of reads on CDS, 3'UTR, and 5'UTR, plotting of count data: pairs, log fold-change, codon frequency and coverage assessment, principal component analysis on codon coverage.
|Bioconductor views||Alignment Coverage PrincipalComponent QualityControl RiboSeq Sequencing Software|
|Maintainer||A. Popa <[email protected]>|
|Package repository||View on GitHub|
Install the latest version of this package by entering the following in R:
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