Man pages for Bioconductor-mirror/Risa
Converting experimental metadata from ISA-tab into Bioconductor data structures

AssayTab-classClass '"AssayTab"', a class for maintaing the information of...
getAnnotatedDataFrameAssayRetrieves an AnnotatedDataFrameAssay.
getAssayRawDataFilenames-methods~~ Methods for Function 'getAssayRawDataFilenames' in Package...
getExpressionSetRetrieves an ExpressionSet for a DNA microarray assay.
getMIAMEMetadataRetrieves the MIAME information about a microarray experiment
getMicroarrayAssayFilenamesListing filenames of microarray-based asssay from an ISAtab...
getMSAssayFilenamesRetrieves a vector with the assay filenames corresponding to...
getRawDataFilenames-methods~~ Methods for Function 'getRawDataFilenames' in Package...
getStudyFilenameRetrieves the study filename to which an assay.filename...
ISAtab-classClass '"ISATab"', a class for maintaing ISATab information
isMicroarrayAssayDetermines if an assay is microarray-based or not.
isMSAssayIndicates if an assay filename corresponds to a mass...
processAssayXcmsSetBuild an xcmsSet object given a mass spectrometry assay and...
processAssayXcmsSet.1factorBuild an xcmsSet object given a mass spectrometry assay and...
readISAtabReads an ISAtab dataset into an R object.
Risa-packageRisa package overview
suggestBiocPackageSuggest Bioconductor pacakges
updateAssayMetadataUpdate metadata into the assay file
write.assay.fileWrite an Assay File from the ISA-Tab dataset
write.investigation.fileWrites the Investigation File of an ISA-Tab dataset
write.isatabWrite an ISA-Tab dataset
write.study.fileWrite a Study File of an ISA-Tab dataset
Bioconductor-mirror/Risa documentation built on June 1, 2017, 1:06 a.m.