API for Bioconductor-mirror/Rqc
Quality Control Tool for High-Throughput Sequencing Data

Global functions
Rqc Man page
Rqc-package Man page
RqcResultSet-class Man page
checkpoint Man page Source code
cycleBasecall Source code
cycleQuality Source code
detectFileFormat Man page Source code
fileInfo Source code
fromRRDNA Man page Source code
matdist Man page Source code
mergeCycleBasecall Source code
mergeCycleQuality Source code
mergeReadFrequency Source code
mergeReadQuality Source code
mergeReadWidth Source code
perCycleBasecall Man page
perCycleBasecall,RqcResultSet-method Man page
perCycleBasecall,list-method Man page
perCycleQuality Man page
perCycleQuality,RqcResultSet-method Man page
perCycleQuality,list-method Man page
perFileInformation Man page
perFileInformation,RqcResultSet-method Man page
perFileInformation,list-method Man page
perFileTopReads Man page
perFileTopReads,RqcResultSet-method Man page
perFileTopReads,list-method Man page
perReadFrequency Man page
perReadFrequency,RqcResultSet-method Man page
perReadFrequency,list-method Man page
perReadQuality Man page
perReadQuality,RqcResultSet-method Man page
perReadQuality,list-method Man page
perReadWidth Man page
perReadWidth,RqcResultSet-method Man page
perReadWidth,list-method Man page
readFrequency Source code
readMeanQuality Source code
readQuality Source code
readWidth Source code
rqc Man page Source code
rqcCycleAverageQualityCalc Man page Source code
rqcCycleAverageQualityPcaCalc Man page Source code
rqcCycleAverageQualityPcaPlot Man page Source code
rqcCycleAverageQualityPlot Man page Source code
rqcCycleBaseCallsCalc Man page Source code
rqcCycleBaseCallsLinePlot Man page Source code
rqcCycleBaseCallsPlot Man page Source code
rqcCycleGCCalc Man page Source code
rqcCycleGCPlot Man page Source code
rqcCycleQualityBoxCalc Man page Source code
rqcCycleQualityBoxPlot Man page Source code
rqcCycleQualityCalc Man page Source code
rqcCycleQualityPlot Man page Source code
rqcFileHeatmap Man page Source code
rqcGroupCycleAverageQualityCalc Man page Source code
rqcGroupCycleAverageQualityPlot Man page Source code
rqcQA Man page
rqcQA,BamFile-method Man page
rqcQA,FastqFile-method Man page
rqcQA,character-method Man page
rqcQA,list-method Man page
rqcReadFrequencyCalc Man page Source code
rqcReadFrequencyPlot Man page Source code
rqcReadQualityBoxCalc Man page Source code
rqcReadQualityBoxPlot Man page Source code
rqcReadQualityCalc Man page Source code
rqcReadQualityPlot Man page Source code
rqcReadWidthCalc Man page Source code
rqcReadWidthPlot Man page Source code
rqcReport Man page Source code
rqcShinyReport Man page Source code
server.Rqc Source code
stats4trim Man page Source code
subsetByGroup Man page Source code
subsetByPair Man page Source code
toRRDNA Man page Source code
ui.Rqc Source code
Bioconductor-mirror/Rqc documentation built on June 1, 2017, 1:10 a.m.