Bioconductor-mirror/Rsamtools: Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import
Version 1.29.0

This package provides an interface to the 'samtools', 'bcftools', and 'tabix' utilities (see 'LICENCE') for manipulating SAM (Sequence Alignment / Map), FASTA, binary variant call (BCF) and compressed indexed tab-delimited (tabix) files.

Getting started

Package details

AuthorMartin Morgan, Herv\'e Pag\`es, Valerie Obenchain, Nathaniel Hayden
Bioconductor views Alignment Coverage DataImport QualityControl Sequencing
MaintainerBioconductor Package Maintainer <[email protected]>
LicenseArtistic-2.0 | file LICENSE
Version1.29.0
URL http://bioconductor.org/packages/release/bioc/html/Rsamtools.html
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("Bioconductor-mirror/Rsamtools")
Bioconductor-mirror/Rsamtools documentation built on June 1, 2017, 1:10 a.m.