Man pages for Bioconductor-mirror/Rtreemix
Rtreemix: Mutagenetic trees mixture models.

bootstrap-methodsMethod for fitting a mutagenetic trees mixture model and...
comp.modelsFunctions for comparing the tree topologies of two...
comp.treesFunctions for quantifying the diversity of the nontrivial...
confIntGPS-methodsMethod for calculating GPS values and their 95% bootstrap...
distribution-methodsMethod for generating the (scaled) probablility distribution...
fit-methodsMethod for fitting mutagenetic trees mixture model to a given...
generate-methodsMethod for generating a random mutagenetic trees mixture...
get.tree.levelsFunction for constructing level vectors
gps-methodsMethods for predicting the GPS of given dataset by using a...
hiv.dataExample of an RtreemixData object
kullback.leiblerKullback-Leibler divergence
L1.distDifferent distances between two given vectors
L2.normL2 norm of a given vector
likelihoods-methodsMethod for predicting the likelihoods of a set of samples...
Pval.distp-value of a given similarity value
RtreemixData-classClass "RtreemixData"
RtreemixGPS-classClass "RtreemixGPS"
RtreemixModel-classClass "RtreemixModel"
RtreemixSim-classClass "RtreemixSim"
RtreemixStats-classClass "RtreemixStats"
sim-methodsMethod for simulating data from a mutagenetic trees mixture...
stability.simStability analysis of the mutagenetic trees mixture model
Bioconductor-mirror/Rtreemix documentation built on June 1, 2017, 1:11 a.m.