Man pages for Bioconductor-mirror/STATegRa
Classes and methods for multi-omics data integration

bioDistbioDist
bioDistclassbioDistclass
bioDistFeaturebioDistFeature
bioDistFeaturePlotbioDistFeaturePlot
bioDistWbioDistW
bioDistWPlotbioDistWPlot
bioMapbioMap
biplotResBiplot of component analysis
caClass-classcaClass
combiningMappingscombiningMappings, combining several mappings for use in the...
createOmicsExpressionSetcreateOmicsExpressionSet
getInitialDataRetrieve initial data from caClass objects
getLoadingsRetrieve component analysis loadings
getMethodInfoRetrieve information about component analysis method
getPreprocessingRetrieve information about preprocessing
getScoresRetrieve component analysis scores
getVAFRetrieve information abotut VAF
holistOmicsHolistOmics an application of NPC on omics datasets
modelSelectionFind optimal common and distinctive components
omicsCompAnalysisComponents analysis for multiple objects
omicsNPComicsNPC, applying the Non-Parametric Combination (NPC) on...
PCA.selectionSelect an optimal number of components using PCA
plotResPlot component analysis results
plotVAFPlot VAF (Variance Explained For) from Component Analysis
selectCommonCompsSelect common components in two data blocks
STATegRaSTATegRa
STATegRa_dataSTATegRa data
STATegRa_data_TCGA_BRCASTATegRa data
STATegRa-defunctDefunct functions in STATegRa
STATegRaUsersGuideSTATegRaUsersGuide
Bioconductor-mirror/STATegRa documentation built on June 1, 2017, 2:15 a.m.