Man pages for Bioconductor-mirror/STRINGdb
STRINGdb (Search Tool for the Retrieval of Interacting proteins database)

add_diff_exp_coloradd_diff_exp_color
add_proteins_descriptionadd_proteins_description
benchmark_ppibenchmark_ppi
benchmark_ppi_pathway_viewbenchmark_ppi_pathway_view
coeffOfvarcoeffOfvar
delColDfdelColDf
diff_exp_example1example of microarray data (data processed from GEO GSE9008)
downloadAbsentFiledownloadAbsentFile
downloadAbsentFileSTRINGdownloadAbsentFileSTRING
get_aliasesget_aliases
get_annotationsget_annotations
get_annotations_descget_annotations_desc
get_bioc_graphget_bioc_graph
get_clustersget_clusters
get_enrichmentget_enrichment
get_graphget_graph
get_homologsget_homologs
get_homologs_besthitsget_homologs_besthits
get_interactionsget_interactions
get_linkget_link
get_neighborsget_neighbors
get_pngget_png
get_ppi_enrichmentget_ppi_enrichment
get_ppi_enrichment_fullget_ppi_enrichment_full
get_proteinsget_proteins
get_pubmedget_pubmed
get_pubmed_interactionget_pubmed_interaction
get_STRING_speciesget_STRING_species
get_subnetworkget_subnetwork
get_summaryget_summary
get_term_proteinsget_term_proteins
interactionsexample of a protein-protein interactions sorted data frame
loadload
load_allload_all
mapmap
mpmp
multi_map_dfmulti_map_df
plot_networkplot_network
plot_ppi_enrichmentplot_ppi_enrichment
plot_ppi_enrichment_graphplot_ppi_enrichment_graph
post_payloadpost_payload
ppie.compLambdappie.compLambda
ppie.compLambdaL1L2ppie.compLambdaL1L2
ppie.compPijppie.compPij
ppie.getNumEdgesBetweenppie.getNumEdgesBetween
ppi_enrichmentppi_enrichment
ppi_enrichment_fullppi_enrichment_full
remove_homologous_interactionsremove_homologous_interactions
renameColDfrenameColDf
set_backgroundset_background
STRINGdb-classClass '"STRINGdb"'
Bioconductor-mirror/STRINGdb documentation built on June 23, 2017, 4:26 p.m.