API for Bioconductor-mirror/SeqArray
Big Data Management of Whole-genome Sequence Variant Calls

Global functions
AddVar Source code
DigestCode Source code
DigestFile Source code
DynamicClusterCall Source code
KG_P1_SampData Man page
MergeAttr Source code
MergeNodeAttr Source code
NumParallel Source code
SeqArray Man page
SeqArray-package Man page
SeqVarGDSClass Man page Source code
SeqVarGDSClass-class Man page
Transpose Source code
UniqueDataFrame Source code
alt Man page
alt,SeqVarGDSClass-method Man page
append_gds Source code
ast.lib Source code
cfunction Source code
cfunction0 Source code
cfunction2 Source code
cfunction3 Source code
cfunction4 Source code
cfunction5 Source code
check_digest Source code
check_dim Source code
close_conn Source code
colData Man page
colData,SeqVarGDSClass-method Man page
crayon Source code
filt Man page
filt,SeqVarGDSClass-method Man page
fixed Man page
fixed,SeqVarGDSClass-method Man page
geno Man page
geno,SeqVarGDSClass,ANY-method Man page
geno,SeqVarGDSClass-method Man page
granges,SeqVarGDSClass-method Man page
header Man page
header,SeqVarGDSClass-method Man page
info Man page
info,SeqVarGDSClass-method Man page
last_str Source code
onAttach Source code
open_bin Source code
open_text Source code
plural Source code
pretty Source code
pretty_size Source code
qual Man page
qual,SeqVarGDSClass-method Man page
ref Man page
ref,SeqVarGDSClass-method Man page
repeat_gds Source code
rowRanges Man page
rowRanges,SeqVarGDSClass-method Man page
seldim Source code
seqAlleleCount Man page Source code
seqAlleleFreq Man page Source code
seqApply Man page Source code
seqAsVCF Man page Source code
seqBED2GDS Man page Source code
seqBlockApply Man page Source code
seqClose Man page
seqClose,SeqVarGDSClass-method Man page
seqClose,gds.class-method Man page
seqDelete Man page Source code
seqDigest Man page Source code
seqExampleFileName Man page Source code
seqExport Man page Source code
seqGDS2SNP Man page Source code
seqGDS2VCF Man page Source code
seqGetData Man page Source code
seqGetFilter Man page Source code
seqGetParallel Man page Source code
seqMerge Man page Source code
seqMissing Man page Source code
seqNumAllele Man page Source code
seqOpen Man page Source code
seqOptimize Man page Source code
seqParApply Man page Source code
seqParallel Man page Source code
seqParallelSetup Man page Source code
seqResetFilter Man page Source code
seqSNP2GDS Man page Source code
seqSetFilter Man page
seqSetFilter,SeqVarGDSClass,ANY-method Man page
seqSetFilter,SeqVarGDSClass,GRanges-method Man page
seqSetFilter,SeqVarGDSClass,GRangesList-method Man page
seqSetFilter,SeqVarGDSClass,IRanges-method Man page
seqSetFilterChrom Man page Source code
seqSetFilterCond Man page Source code
seqStorageOption Man page Source code
seqSummary Man page Source code
seqSystem Man page Source code
seqTranspose Man page Source code
seqVCF2GDS Man page Source code
seqVCF_Header Man page Source code
seqVCF_SampID Man page Source code
str Source code
summary_allele Source code
summary_annot_id Source code
summary_annot_qual Source code
summary_chrom Source code
summary_contig Source code
summary_digest Source code
summary_filter Source code
summary_format Source code
summary_geno Source code
summary_info Source code
summary_phase Source code
summary_position Source code
summary_reference Source code
summary_samp_annot Source code
summary_sample_id Source code
summary_variant_id Source code
toAtomicList Source code
var_path Source code
variableLengthToList Source code
variableLengthToMatrix Source code
vcf_type Source code
Bioconductor-mirror/SeqArray documentation built on July 1, 2017, 6:32 a.m.