Bioconductor-mirror/SimBindProfiles: Similar Binding Profiles
Version 1.15.0

SimBindProfiles identifies common and unique binding regions in genome tiling array data. This package does not rely on peak calling, but directly compares binding profiles processed on the same array platform. It implements a simple threshold approach, thus allowing retrieval of commonly and differentially bound regions between datasets as well as events of compensation and increased binding.

Getting started

Package details

AuthorBettina Fischer, Enrico Ferrero, Robert Stojnic, Steve Russell
Bioconductor views Microarray Software
MaintainerBettina Fischer <[email protected]>
LicenseGPL-3
Version1.15.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("Bioconductor-mirror/SimBindProfiles")
Bioconductor-mirror/SimBindProfiles documentation built on June 1, 2017, 2:23 a.m.