API for Bioconductor-mirror/SomaticSignatures
Somatic Signatures

Global functions
MutationalSignatures Man page
MutationalSignatures-class Man page
SomaticSignatures Man page
SomaticSignatures-package Man page
assessNumberSignatures Man page Source code
assessOneSignature Source code
cluster-spectrum Man page
clusterSpectrum Man page Source code
constructMotifs3 Source code
correlateSignatures Source code
coscor Source code
cospos Source code
cossim Source code
decomposition-signatures Man page
dfConvertColumns Man page Source code
findSignatures Man page Source code
fitted Man page
fitted,MutationalSignatures-method Man page
gcContent Man page Source code
hs-chrs Man page
hsAllosomes Man page Source code
hsAutosomes Man page Source code
hsLinear Man page Source code
hsToplevel Man page Source code
identifySignatures Man page Source code
identifySignaturesVRanges Source code
k3we Man page
k3wg Man page
kmeansDecomposition Source code
kmeansSignatures Source code
kmerFrequency Man page Source code
kmers Man page
kmers-data Man page
meltSignatures Source code
motifMatrix Man page Source code
mutationContext Man page Source code
mutationContextMutect Man page Source code
mutationDistance Man page Source code
mutational-normalization Man page
mutational-plots Man page
mutational-signatures Man page
ncbi Man page Source code
nmfDecomposition Man page Source code
nmfSignatures Man page Source code
normalizeMotifs Man page Source code
observed Man page
observed,MutationalSignatures-method Man page
pcaDecomposition Man page Source code
pcaSignatures Man page Source code
plotFittedSpectrum Man page Source code
plotMutationSpectrum Man page Source code
plotNumberSignatures Man page Source code
plotObservedSpectrum Man page Source code
plotRainfall Man page Source code
plotSampleMap Man page Source code
plotSamples Man page Source code
plotSignatureMap Man page Source code
plotSignatures Man page Source code
plotSpectrum Source code
plotVariantAbundance Man page Source code
readMutect Man page Source code
retreiveSignatures Source code
samples Man page
samples,MutationalSignatures-method Man page
sca-data Man page
sca_mm Man page
sca_motifs_tiny Man page
sca_sigs Man page
seqchar Man page Source code
show Man page
show,MutationalSignatures-method Man page
showSome Source code
signatureLabels Source code
signatures Man page
signatures,MutationalSignatures-method Man page
signatures21 Man page
signatures21-data Man page
sigs_nmf Man page
sigs_pca Man page
theme_small_axis Source code
theme_ss Source code
ucsc Man page Source code
variants-utils Man page
Bioconductor-mirror/SomaticSignatures documentation built on June 1, 2017, 2:24 a.m.