Man pages for Bioconductor-mirror/SpeCond
Condition specific detection from expression data

createParameterMatrixCreate or Modify the SpeCond argument parameters
expressionSpeCondExampleThe expression matrix example used in the SpeCond package
expSetSpeCondExampleAn ExpressionSet example object used in the SpeCond package
fitNoPriorWithExclusionFit the expression values profile with a mixture of normal...
fitPriorFit the expression value profiles with a mixture of normal...
getDefaultParameterGet the default parameter to use SpeCond function
getFullHtmlSpeCondResultVisualisation function of the SpeCond analysis results
getGeneHtmlPageVisualise for each gene the condition-specific detection...
getMatrixFromExpressionSetObtain the expression matrix from an ExpressionSet object
getProfileCreate the condition-specific profile of specific matrix...
getSpecificOutliersStep1Detect the condition-specific as outliers in for the first...
getSpecificResultDetect the condition-specific genes for the second step on...
simulatedSpeCondDataAn example of simulated expression matrix used in the SpeCond...
SpeCondThe condition-specific detection function
writeGeneResultWrite a condition-specific analysis result text file
writeSpeCondResultWrite in text files the main result of the SpeCond function
writeUniqueProfileSpecificResultWrite the specific profiles from the SpeCond analysis
Bioconductor-mirror/SpeCond documentation built on June 1, 2017, 2:25 a.m.