This package allows the user to create, manipulate, and visualize splicing graphs and their bubbles based on a gene model for a given organism. Additionally it allows the user to assign RNA-seq reads to the edges of a set of splicing graphs, and to summarize them in different ways.
|Author||D. Bindreither, M. Carlson, M. Morgan, H. Pagès|
|Bioconductor views||AlternativeSplicing Annotation DataRepresentation GeneExpression Genetics RNASeq Sequencing Transcription Visualization|
|Maintainer||H. Pagès <[email protected]>|
|Package repository||View on GitHub|
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