SwimR is an R-based suite that calculates, analyses, and plots the frequency of C. elegans swimming behavior over time. It places a particular emphasis on identifying paralysis and quantifying the kinetic elements of paralysis during swimming. Data is input to SwipR from a custom built program that fits a 5 point morphometric spine to videos of single worms swimming in a buffer called Worm Tracker.
|Author||Jing Wang <[email protected]>, Andrew Hardaway <[email protected]> and Bing Zhang <[email protected]>|
|Maintainer||Randy Blakely <[email protected]>|
|Package repository||View on GitHub|
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