Default theme to be passed to the gplots produced by the TPP package.
Internally, the theme is used as an argument for the function
ggplot2::theme_set in order specify the appearance of the melting curve plots.
The specified plot properties include bold font and increased font size for axis labels and title, as well as a 90 degree angle for y axis labels.
ggplot theme with default settings for melting plot appearance.
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# Import data: data(hdacTR_smallExample) tpptrData <- tpptrImport(configTable=hdacTR_config, data=hdacTR_data) # Obtain template with default settings: normRequirements <- tpptrDefaultNormReqs() print(normRequirements) # Relax filter on the 10th fold change column for # normalization set production: normRequirements$fcRequirements[3,3] <- 0.25 # Perform normalization: tpptrNorm <- tpptrNormalize(data=tpptrData, normReqs=)
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