API for Bioconductor-mirror/TSSi
Transcription Start Site Identification

Global functions
TSSi Man page
TSSi-package Man page
TssData Man page
TssData-TSSi Man page
TssData-class Man page
TssNorm Man page
TssNorm-TSSi Man page
TssNorm-class Man page
TssResult Man page
TssResult-TSSi Man page
TssResult-class Man page
[,TssData,ANY,ANY,ANY-method Man page
[,TssData-method Man page
[,TssNorm,ANY,ANY,ANY-method Man page
[,TssNorm-method Man page
[,TssResult,ANY,ANY,ANY-method Man page
[,TssResult-method Man page
annotation Man page
annotation,TssData-method Man page
annotation-TSSi Man page
asRangedData Man page
asRangedData-TSSi Man page
asRangedData-methods Man page
assessAbs Source code
assessAbsGrad Source code
assessGradPoisson Man page Source code
assessPoisson Man page Source code
assessRatio Source code
assessSteps Source code
assessStepsGrad Source code
breakInSegments Source code
catLegend Source code
checkIdentify Source code
checkNormalize Source code
checkSegmentize Source code
checkVariable Source code
colFun Source code
counts Man page
counts,TssData-method Man page
counts-TSSi Man page
cumulativeReads Source code
delta Man page
delta,TssResult-method Man page
delta-TSSi Man page
dentifyCore Source code
end,TssData-method Man page
end-TSSi Man page
expect Man page
expect,TssResult-method Man page
expect-TSSi Man page
exppdf Source code
fit Man page
fit,TssNorm-method Man page
fit-TSSi Man page
get-TSSi Man page
get-methods Man page
getArgs Source code
getSlotIndex Source code
grepStrand Source code
idenfify-methods Man page
identifyStartSites Man page
identifyStartSites,TssData-method Man page
identifyStartSites-TSSi Man page
nReadsLoglik Source code
nReadsLoglikGrad Source code
names,TssData-method Man page
names-TSSi Man page
nitialFun Source code
nitialRatio Source code
normDup Source code
normalize Source code
normalizeCounts Man page
normalizeCounts,TssData-method Man page
normalizeCounts-TSSi Man page
normalizeCounts-methods Man page
parameters Man page
parameters,TssData-method Man page
parameters-TSSi Man page
physcoCounts Man page
physcoCounts-TSSi Man page
physcoCounts-data Man page
plot Man page
plot,TssData,ANY-method Man page
plot,TssData-method Man page
plot,TssNorm,ANY-method Man page
plot,TssNorm-method Man page
plot,TssResult,ANY-method Man page
plot,TssResult-method Man page
plot-TSSi Man page
plot-methods Man page
plotTss Source code
ratio Man page
ratio,TssNorm-method Man page
ratio-TSSi Man page
reads Man page
reads,TssData-method Man page
reads-TSSi Man page
readsAsRangedData Man page
readsAsRangedData,TssData-method Man page
readsAsRangedData-TSSi Man page
revertPars Source code
segmentizeCounts Man page
segmentizeCounts,integer,integer-method Man page
segmentizeCounts-TSSi Man page
segmentizeCounts-methods Man page
segments Man page
segments,TssData-method Man page
segments-TSSi Man page
segmentsAsRangedData Man page
segmentsAsRangedData,TssData-method Man page
segmentsAsRangedData-TSSi Man page
show,TssData-method Man page
show,TssNorm-method Man page
show,TssResult-method Man page
show-TSSi Man page
showClassInfo Source code
showParameters Source code
showSegment Source code
showSome Source code
start,TssData-method Man page
start-TSSi Man page
subtract-functions Man page
subtractExpectation Man page Source code
subtractExpectation-TSSi Man page
tss Man page
tss,TssResult-method Man page
tss-TSSi Man page
tssAsRangedData Man page
tssAsRangedData,TssResult-method Man page
tssAsRangedData-TSSi Man page
useMulticore Source code
Bioconductor-mirror/TSSi documentation built on June 1, 2017, 3:20 a.m.