plotPrimordiumProfile: Plot Primordium Profile

Description Usage Arguments Value Author(s) Examples

View source: R/plotPrimordiumProfile.R

Description

Visualizes primordium signal as a function of position with median and median absolute deviation across samples.

Usage

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plotPrimordiumProfile(x, add, ylab, lwd, cex.lab, cex.axis, xlim, ylim, main, 
    col, lty, alpha)

Arguments

x

A matrix of data where rows are samples and columns are sequential positions.

add

A logical indicating whether or not to add to the existing plot.

ylab

The y-axis label.

lwd

Integer specifying width of lines.

cex.lab

Integer specifying size of labels.

cex.axis

Integer specifying size of axis labels.

xlim

An optional vector of length 2 specifying the limits for the x-axis.

ylim

An optional vector of length 2 specifying the limits for the y-axis.

main

Plot title.

col

Line colour.

lty

Style of line

alpha

A numeric between zero and one specifying the level of transparency for the shaded region.

Value

Produces a plot of signal vs position summarizing across multiple primordium samples.

Author(s)

Joseph D. Barry

Examples

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if (interactive()) vignette(topic="genPaperFigures", package="TimerQuant")

Bioconductor-mirror/TimerQuant documentation built on June 1, 2017, 3:23 a.m.