Bioconductor-mirror/ToPASeq: Package for Topology-based Pathway Analysis of RNASeq data
Version 1.11.0

Implementation of seven methods for topology-based pathway analysis of both RNASeq and microarray data: SPIA, DEGraph, TopologyGSA, TAPPA, PRS, PWEA and a visualization tool for a single pathway.

Getting started

Package details

AuthorIvana Ihnatova, Eva Budinska
Bioconductor views DifferentialExpression GeneExpression GraphAndNetwork Microarray NetworkEnrichment Pathways RNASeq Software Visualization
MaintainerIvana Ihnatova <[email protected]>
LicenseAGPL-3
Version1.11.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("Bioconductor-mirror/ToPASeq")
Bioconductor-mirror/ToPASeq documentation built on June 1, 2017, 3:24 a.m.