Man pages for Bioconductor-mirror/Uniquorn
Identification of cancer cell lines based on their weighted mutational or variational fingerprint

add_custom_vcf_to_databaseAdds a custom vcf file to the three existing cancer cell line...
create_bed_filecreate_bed_file
identify_vcf_fileidentify_VCF_file
initiate_canonical_databasesinitiate_canonical_databases
initiate_db_and_load_datainitiate_db_and_load_data
parse_ccle_genotype_dataparse_ccle_genotype_data
parse_cosmic_genotype_dataparse_cosmic_genotype_data
parse_vcf_fileparse_vcf_file
re_calculate_cl_weightsRe-calculate sim_list_weights
remove_custom_vcf_from_databaseRemoves a cancer cell line training fingerprint (vcf file)...
show_contained_clsshow_contained_cls
show_contained_mutationsshow_contained_mutations
show_contained_mutations_for_clshow_contained_mutations_for_cl
show_which_cls_contain_mutationshow_which_cls_contain_mutation
split_addsplit_add
write_data_to_dbwrite_data_to_db
Bioconductor-mirror/Uniquorn documentation built on June 23, 2017, 4:29 p.m.