state-methods: Accessor for the Viterbi state path

Description Usage Arguments

Description

The states are represented as integers: 1=homozygous deletion, 2=hemizygous deletion, 3=diploid normal heterozygosity, 4=diploid region of homozygosity, 5=single copy gain, 6=two or more copy gain.

Usage

1
2
## S4 method for signature 'Viterbi'
state(object)

Arguments

object

a Viterbi object


Bioconductor-mirror/VanillaICE documentation built on July 1, 2017, 6:34 a.m.