Man pages for Bioconductor-mirror/XBSeq
Test for differential expression for RNA-seq data

apaUsageTesting differential alternative polyadenylation (apa) usage...
conditionsAccessor functions for the 'conditions' information in a...
countsAccessor functions for the 'counts' information in a...
dispEstFunction to access the dispersion estimation for each gene
dispTableAccess the dispersion table information for a XBSeqDataSet...
estimateRealCountPreliminary step to estimate the true signal based on...
estimateSCVEstimate squared coefficient of variation for each gene
ExampleDataExample Datasets used in the manual pages as well as in...
fitInfoAccessor function for the fitInfo objects in a XBSeqDataSet
getSignalVarsEstimate variance of the signal based on variance summation...
MAplotGenerate maplot after differential expression test
plotSCVEstsPlot estimated squared coefficient of variation
XBplotExamine the distribution of observed signal and background...
XBSeqExpress function to carry out XBSeq analysis
XBSeqDataSet-classClass '"XBSeqDataSet"'
XBSeq-packageDifferential expression analysis of RNA sequencing data by...
XBSeqTestXBSeq test for differential expression
Bioconductor-mirror/XBSeq documentation built on July 28, 2017, 5:20 a.m.