Bioconductor-mirror/annmap: Genome annotation and visualisation package pertaining to Affymetrix arrays and NGS analysis.
Version 1.19.0

annmap provides annotation mappings for Affymetrix exon arrays and coordinate based queries to support deep sequencing data analysis. Database access is hidden behind the API which provides a set of functions such as genesInRange(), geneToExon(), exonDetails(), etc. Functions to plot gene architecture and BAM file data are also provided. Underlying data are from Ensembl.

Getting started

Package details

AuthorTim Yates <[email protected]>
Bioconductor views Annotation Microarray OneChannel ReportWriting Transcription Visualization
MaintainerChris Wirth <[email protected]>
LicenseGPL-2
Version1.19.0
URL http://annmap.cruk.manchester.ac.uk
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("Bioconductor-mirror/annmap")
Bioconductor-mirror/annmap documentation built on June 1, 2017, 4:19 a.m.