Bioconductor-mirror/bamsignals: Extract read count signals from bam files
Version 1.9.0

This package allows to efficiently obtain count vectors from indexed bam files. It counts the number of reads in given genomic ranges and it computes reads profiles and coverage profiles. It also handles paired-end data.

Getting started

Package details

AuthorAlessandro Mammana [aut, cre], Johannes Helmuth [aut]
Bioconductor views Alignment Coverage DataImport Sequencing
MaintainerAlessandro Mammana <[email protected]>
LicenseGPL-2
Version1.9.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("Bioconductor-mirror/bamsignals")
Bioconductor-mirror/bamsignals documentation built on June 1, 2017, 4:23 a.m.