gds2mlumi: Convert Genomic Data Structure file to Methylumiset or...

Description Usage Arguments Value Author(s) Examples

View source: R/gds2mlumi.R

Description

Convert a Genomic Data Structure object back into a methylumi object, with subsetting features.

Usage

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gds2mlumi(gds, i, j)
gds2mset(gds, i, j, anno)

Arguments

gds

a gds object

i

Index of rows

j

Index of Columns

anno

If NULL, function will attempt to guess the annotation to be used. Otherwise can be specified with either "27k", "450k", "epic" or "unknown".

Value

A methylumi object

Author(s)

Tyler Gorrie-Stone

Examples

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data(melon)
e <- es2gds(melon, "melon.gds")
gds2mlumi(e)
closefn.gds(e)
unlink("melon.gds")

Bioconductor-mirror/bigmelon documentation built on June 1, 2017, 4:26 a.m.