Files in Bioconductor-mirror/blima
Tools for the preprocessing and analysis of the Illumina microarrays on the detector (bead) level

DESCRIPTION
NAMESPACE
NEWS
R/RcppExports.R R/analyzeBeadLevel.R R/analyzeProbeLevel.R R/bgCorrect.R R/quantileNormalize.R R/reporting.R R/standardbgCorrect.R R/statisticsAndVisualisation.R R/utils.R R/vst.R inst/blima-package.Rd man/aggregateAndPreprocess.Rd man/bacgroundCorrect.Rd man/bacgroundCorrectSingleArray.Rd man/backgroundChannelSubtract.Rd man/backgroundChannelSubtractSingleArray.Rd man/blima-package.Rd man/channelExistsIntegrityWithLogicalVectorList.Rd man/checkIntegrity.Rd man/checkIntegrityLogical.Rd man/checkIntegrityOfListOfBeadLevelDataObjects.Rd man/checkIntegrityOfSingleBeadLevelDataObject.Rd man/chipArrayStatistics.Rd man/createSummarizedMatrix.Rd man/doAction.Rd man/doProbeTTests.Rd man/doTTests.Rd man/filterBg.Rd man/getNextVector.Rd man/initMeanDistribution.Rd man/insertColumn.Rd man/interpolateSortedVector.Rd man/interpolateSortedVectorRcpp_.Rd man/log2TransformPositive.Rd man/meanDistribution.Rd man/nonParametricEstimator.Rd man/nonPositiveCorrect.Rd man/nonPositiveCorrectSingleArray.Rd man/numberOfDistributionElements.Rd man/performXieCorrection.Rd man/plotBackgroundImageAfterCorrection.Rd man/plotBackgroundImageBeforeCorrection.Rd man/quantileNormalize.Rd man/readToVector.Rd man/selectedChannelTransform.Rd man/selectedChannelTransformSingleArray.Rd man/singleArrayNormalize.Rd man/singleChannelExistsIntegrityWithLogicalVector.Rd man/singleCheckIntegrityLogicalVector.Rd man/singleNumberOfDistributionElements.Rd man/updateMeanDistribution.Rd man/varianceBeadStabilise.Rd man/varianceBeadStabiliseSingleArray.Rd man/vstFromLumi.Rd man/writeBackgroundImages.Rd man/xieBacgroundCorrect.Rd man/xieBacgroundCorrectSingleArray.Rd
src/RcppExports.cpp
src/interpolateSortedVector.cpp
vignettes/bibliography.bib
vignettes/blima.rnw
vignettes/content/01introduction01.tex
vignettes/content/01introduction02.tex
vignettes/content/01introduction03.tex
vignettes/content/02backgroundCorrection01.tex
vignettes/content/02backgroundCorrection02.tex
vignettes/content/02backgroundCorrection03.tex
vignettes/content/03varianceStabilizing01.tex
vignettes/content/03varianceStabilizing02.tex
vignettes/content/04quantileNormalize.tex
vignettes/content/05annotation01.tex
vignettes/content/05annotation02.tex
vignettes/content/06dataTesting01.tex
vignettes/content/06dataTesting02.tex
vignettes/content/06dataTesting03.tex
vignettes/content/07summarization.tex
Bioconductor-mirror/blima documentation built on June 1, 2017, 5:22 a.m.