Man pages for Bioconductor-mirror/categoryCompare
Meta-analysis of high-throughput experiments using feature annotations

breakEdgesBreak Cytoscape (or graphNEL) Network Edges
breakEdges-methodsMethods for Function 'breakEdges' in Package...
categoryCompare-packageMeta-analysis of high-throughput experiments using feature...
ccCompareComparison of enriched annotations
ccCompareCollection-classClass '"ccCompareCollection"'
ccCompareGeneric-methodsMethods for Function 'ccCompareGeneric' in Package...
ccCompareResult-classClass '"ccCompareResult"'
ccDataTest data for 'categoryCompare'
ccEnrichPerform annotation enrichment for multiple gene lists
ccEnrichCollection-classClass "ccEnrichCollection"
ccEnrichResult-classClass "ccEnrichResult"
ccGeneList-classClass "ccGeneList"
ccOptions-classClass "ccOptions"
ccOutCyt-methodsMethods for Function 'ccOutCyt' in Package 'categoryCompare'
ccSigList-classClass '"ccSigList"'
cwReload-methodsMethods for Function 'cwReload' in Package 'categoryCompare'
cytOutData-methodsMethods for Function 'cytOutData'
cytOutNodes-methodsMethods for Function 'cytOutNodes'
fdrNumber of FDR runs to perform
GENccEnrichResult-classClass '"GENccEnrichResult"'
getGeneSymbolEntrez to name, symbol, GO and path conversion, as well as...
graphType-methodsgraphType
HyperGParamsCC-classClass "HyperGParamsCC"
HyperGResultCC-classClass "HyperGResultCC"
hyperGTestCCHypergeometric testing with false discovery rate
listNameslistNames
mergedData-classClass '"mergedData"'
mergeLists-methodsFunction 'mergeLists' in Package 'categoryCompare'
minCountminCount
minNodesDelete nodes with less than a certain number of genes...
pvalueTypeType of p-values to return from object
resetColors-methodsresetColors
show-methodsMethods for Function show in Package 'categoryCompare'
Bioconductor-mirror/categoryCompare documentation built on June 1, 2017, 5:26 a.m.