Man pages for Bioconductor-mirror/cellHTS
Analysis of cell-based screens

annotateAnnotates the gene IDs of a given cellHTS object
bdgpbiomartDataset with annotation of CG identifiers
BscoreB score normalization
configureConfigures the plates and plate result files
data-KcViabA sample cellHTS object - D. melanogaster genome-wide RNAi...
data-KcViabSmallA sample cellHTS object - D. melanogaster genome-wide RNAi...
getEnVisionRawDataRead a plate file obtain from EnVision Plate Reader
getLibraryPlate384-well plate assay format to a 96-well plate library format
getMatrixCreate a matrix with replicate data in columns
imageScreenExperiment-wide quality control plot of a cellHTS object
normalizeChannelsNormalization of dual-channel data and data transformation
normalizePlatesPlate-wise data normalization, and data transformation
oneRowPerIdRearrange dataframe entries such that there is exactly one...
plotPlateLibraryPlate plot of the raw data of the four consecutive 96-well...
plotSpatialEffectsPlate plot with the row and column offsets estimated by the B...
print.cellHTSPrinting cellHTS objects
readPlateDataRead a collection of plate reader data files
ROCCreates an object of class "ROC" which can be plotted as a...
screenMatchMatching the gene annotation of two screens
summarizeChannelsNormalization and transformation of dual-channel data
summarizeReplicatesSummarizes between normalized replicate values given in a...
writeReportCreate a directory with HTML pages of linked tables and plots...
writeTabWrite the data from a cellHTS object to a tab-delimited file
write.tabdelWrapper to function 'write.table' used to write data to a...
Bioconductor-mirror/cellHTS documentation built on June 1, 2017, 5:27 a.m.